CDS

Accession Number TCMCG051C22742
gbkey CDS
Protein Id XP_006380769.1
Location complement(join(1658091..1658180,1658284..1658498,1658594..1658631,1658766..1658848,1659464..1659601,1659817..1659912,1660866..1661045,1661209..1661274,1662050..1662181,1663088..1663202,1663409..1663509,1663828..1663956,1664038..1664289,1664370..1664594))
Gene LOC7480138
GeneID 7480138
Organism Populus trichocarpa

Protein

Length 619aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006380707.2
Definition DEAD-box ATP-dependent RNA helicase 16 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD-box ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14810        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGAAGGCCGATAAAACTAAAGAGAAAAAGGAAAAAGAGAGCGAACACAAACAAGAAATACAATTAAACGAGGAACCGGATGTAGTAGAAGAAGAAGACGACGAAGCACAGAGCTTTGAAGAGTTAGGGTTAGACCCTAGGCTAATTCGTGCCCTAAACAAGAAAGAAATTAGCATTGCAGAGCCCACTCCAATTCAGCGAGCCGCTATTCCTCTAATACTTCAAGGGAAAGACGTGGTTGCACGAGCGAAAACAGGGTCAGGGAAGACATTAGCTTACTTGCTTCCTTTGCTTCAGAAGCTTCTCAGTACGGCTGATTCGAATCGAAAAAAGCTTTCACCTTCAGCATTTATTCTGGTGCCAAGTGGAGAGTTATGTCAACAGGTTTATAAGGAGGTTTCGTCGCTGATTGATTCCTGTAAAGCTCAATTGAAAGTTGTTCAGTTGACTAGCAACATGCCTGCTTCTGATTTGCGGAACGCGTTGGCTGGGCCGCCCGATATTTTGGTGTCTACTCCTTCTTGTGTAGCCAAGTCCTTGTCAGTTGGTGTACTAAAATCGGAATCTATTAATGACTCACTTGAAATTCTTGTTCTTGATGAGGCAGATCTCTTGTTGTCATTTGGCTATGAAGAAGATCTCAAAGCTCTTACTGCTCTTGTCCCAAGACGTTGTCAATGCCTTCTTATGTCTGCAACGTCAAGTGCTGATGTTGACAAACTGAAGAAGCTCGTTCTGCATAATCCATATGTTTTGACCTTGCCAGAAGTTGAAGGTGTCAAGGATGAAGTTATCCCCAAAAATGTTCAGCAATTTTGGGTTTCATGTGGTGATCGTGACAAGTTAGTTCATATTCTTGCTCTTTTGAAGCTGGATCTGGTTCAGAAAAAAGTTTTGATATTTACTAATGCCATTGATATGAGTTTCAGATTGAAATTGTTTTTAGAGAAGTTTGGAATAAAGTCTGCTGTTTTAAATGCTGAGTTGCCGCAGAATTCTCGTCTCCATATCCTAGAGGAATTCAATGCTGGGCTTTTTGATTATTTGATTGCAACGGATGACAGAGAAACAAAAGAAAAGGAAAAAGCCAACGAGGGAAGTCTTGCTGAGACAAGAAAATCAAAAAAGCATGCCAAGCAAAAGTTGGACTCAGAATTTGGAGTGGTGAGGGGAATTGACTTCAAAAATGTACACACGGTTATAAATTATGATATGCCTCTAAGTGCCACCGGATATGTACATCGAATTGGACGTACTGGAAGAGCTTACAGTACTGGTTCTTCTGTTTCTCTGGTTTCTCCAGATGAGATGGAAATTCTCGAAGAAATAAAATCCTTTTTAGGGGATGACGAAAACAATGAATCGAATGTTATTTCTCCATATCCTTTGCTCACAAAGAATGCAGTGGAATCTTTACGGTACAGGGCCGAGGACACAGCAAAGAGTGTGACAAAAATTGCTGTCAGAGAAGCACGAGCTCAGGATTTGAGAAATGAAATTCTTAACTCTGAAAAGTTGAAGGCTCATTTTGAAGTCAATCCAAGGGATTTAGATCTTCTAAAACATGACAAAGTTCTGAGCAAGAAGCCCCCTGCTCCACATCTTTCTGATGTGCCTGACTACTTATTGGATGCAACAACCAAGGAAGCAAGCAAGATGGTTAAGCTTGCGAGAGCTGCAATGGGAAACAACAACTCTGGTCGCCGCCAAGGACCAAAGAGAAACTTCAGAAAAAGCAAAGACCCCCTCAAGTCTTTCTCTGCTGAGGGGCCGAGGAGAGGTCGCAAAGGTGGAATGAAGAGAGAAGGAAAAGACGGGGATGATACTCATAAACACAAGAAGAAAAAAAATCTCTAA
Protein:  
MVKADKTKEKKEKESEHKQEIQLNEEPDVVEEEDDEAQSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQKLLSTADSNRKKLSPSAFILVPSGELCQQVYKEVSSLIDSCKAQLKVVQLTSNMPASDLRNALAGPPDILVSTPSCVAKSLSVGVLKSESINDSLEILVLDEADLLLSFGYEEDLKALTALVPRRCQCLLMSATSSADVDKLKKLVLHNPYVLTLPEVEGVKDEVIPKNVQQFWVSCGDRDKLVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDRETKEKEKANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKNVHTVINYDMPLSATGYVHRIGRTGRAYSTGSSVSLVSPDEMEILEEIKSFLGDDENNESNVISPYPLLTKNAVESLRYRAEDTAKSVTKIAVREARAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGNNNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGMKREGKDGDDTHKHKKKKNL